Re: [Freesurfer] Hippocampus subfields outputs missing

2019-12-06 Thread Iglesias Gonzalez, Juan E.
Dear Naveed, You need the development version; these files are not given by FreeSurfer 6.0. Cheers, /Eugenio Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) http://www.jeiglesias.com From: on behalf of Muhammad Naveed Iqbal Qureshi Reply-To: Freesurfer

[Freesurfer] Hippocampus subfields outputs missing

2019-12-06 Thread Muhammad Naveed Iqbal Qureshi
External Email - Use Caution Hi I ran the following command not the subject on HPC module load matlab/r2013a module load freesurfer/6.0.0 source $FREESURFER_HOME/SetUpFreeSurfer.sh fixup_mni_paths recon-all -all -no-isrunning -s /hpf/projects/glongoni/ADHD-200/$file -subjid

[Freesurfer] 4-year PhD studentship ENIGMA Antisocial Behavior

2019-12-06 Thread Stephane De Brito
External Email - Use Caution Dear all, We have a 4-year fully funded PhD studentship available to work on our ENIGMA working group focusing on different antisocial phenotypes.

Re: [Freesurfer] PETSurfer individual atlas for subcortocal segmentation

2019-12-06 Thread Greve, Douglas N.,Ph.D.
Hi Boris, I'll try to get to it today. Unfortunately, I think this is going to require a fair amount of effort on my part. When I wrote this part of PETsurfer, I just did not make it super flexible. doug On 12/5/2019 10:17 PM, Boris Rauchmann wrote: External Email - Use Caution Did

[Freesurfer] Thickness problem

2019-12-06 Thread Gwang-Won Kim
External Email - Use CautionHi there, I obtained results for right thickness using aparcstats2table.Then, ANCOVA was used to compared right thickness between two group (age, sex, edu, ICV as covariates)using SPSS. A group showed higher right thickness in the superior

[Freesurfer] Postdoctoral Researcher in Neuroimaging at Karolinska Institute

2019-12-06 Thread Joana Braga Pereira
External Email - Use Caution Dear all, We are looking for a Postdoc to work in an interdisciplinary and internationally competitive environment at Karolinska Institute, one of the top medical universities in the world and the home for the Nobel Prize in Medicine. We combine