[Freesurfer] Trac-all Error

2020-04-11 Thread Hua, Jessica
External Email - Use Caution Hi FreeSurfer, I am running trac-all prepocessing using a configuration file. I tried preprocessing a couple of participants, and I keep getting this error: #- #@# Tensor fit Sat Apr 11 21:29:36 PDT 2020 dtifit

[Freesurfer] Queries on the Function of Freesurfer

2020-04-11 Thread Koustav Chatterjee
External Email - Use Caution Dear all, I am a beginner in FreeSurfer world. I have 4 questions. It would be kind enough if you could clarify my confusions. - I have came across that 'Freesurfer can reconstruct 2D cortical surface from 3D T1 MRI brain image'. However, I know

Re: [Freesurfer] Freeview_Linux_Subsystem

2020-04-11 Thread fsbuild
External Email - Use Caution Hello Kristian, I have been looking at this as well, and my understanding is things are not configured “out of the box” for an X-Windows client like freeview running under the Windows Linux subsystem to work with the 3rd party Xming software running

[Freesurfer] code for estimating volume

2020-04-11 Thread Kate Marvel
External Email - Use Caution Hi Iglesias, I would like to learn the two ways for estimating volumes mentioned in another post, see below. Please send me the codes in Freesurfer to do this. Thank you, Kate -- Forwarded message - From: Iglesias Gonzalez, Juan E.

[Freesurfer] Freeview_Linux_Subsystem

2020-04-11 Thread Kristian Stefanov
External Email - Use Caution Dear developers, I’m running into an issue using freeview. I have installed freesurfer on a Linux subsystem for Windows (Ubuntu 18.04 LTS) according to the guidelines (https://surfer.nmr.mgh.harvard.edu/fswiki/WindowsSupport) including Xming. The frr