Hi Freesurfer developers,
I have a subsample of a FS dataset that have scanner-originated
hyperintensities in the bilateral supramarginal/temporal lobes. I've manually
removed these hyperintensities by editing the wm.mgz, yet FS seems to be unable
to recognize these edits when looking at the
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Ian,
You can use the mris_anatomical_stats command with the -b option. E.g.,
mris_anatomical_stats -b subjectid lh
will give you a tabular output containing the total gray matter volume in
the 3rd column:
128449 86239 *243375 *2.588 0.876
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Morning Freesurfers.
Can you describe how the FS stat Total cortical gray matter volume is
calculated from the files in the freesurfer subject directory? Is there
an mgz file where each voxel has an estimated percentage grey matter
here as the
