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Hi Ruopeng,
ok, thanks.
Best,
René
Von: freesurfer-boun...@nmr.mgh.harvard.edu
Im Auftrag von Ruopeng Wang
Gesendet: Freitag, 29. Mai 2020 16:24
An: Freesurfer support list
Betreff: Re: [Freesurfer] freeview command for displaying selected labels
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Hello Freesurfer List Subscribers,
Please be aware we have added another option to enable Freeview to run under
Windows 10.
In addition to the VirtualBox Ubuntu disk image you can download, there is now
documentation about how to run Freeview in a Li
If you upload the data, I'll take a look. Upload both the structural and
the fMRI. See instructions below
From the linux command line,
Create the file you want to upload, eg,
cd $SUBJECTS_DIR
tar cvfz subject.tar.gz ./subject
Now log into our anonymous FTP site:
ftp surfer.nmr.mgh.harvard.edu
I
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Dear colleagues,
we are currently looking for an MR-Physicist/Engineer at the post-doctoral
level at the TU Dresden.
Details can be found here:
https://www.verw.tu-dresden.de/StellAus/download.asp?file=06-2020\Krug_WIMI_eng_210220_160.pdf
Please,
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Just a follow up here. I tried the command below on a machine with v.6, and the
flag was recognised, but the registration was still off. No change to the
output with the flag included.
Mason T Wells, MSc
PhD student
School of Optometry and Vision Sci
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Hi Doug,
I have FS v6.0 and tried the following command:
ERROR: Flag --init-coreg unrecognized.
--s PPT_001 --feat
/cubric/data/c1749990/PhD/Data/PMA_retinoScans/PPT_001/run1_pre_processed_functional.feat/
--int /cubric/data/c1749990/PhD/Data/PMA_re
Generally, this is a bad idea as it will be impossible to tell
scanner-induced diffs from group-induced diffs
On 6/1/2020 11:36 PM, John wrote:
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Hi friends,
Using freesurfer, Is it ok to compare cortical thickness for group-1
people from one scanner, while
Right now, I'm just guessing what the problem is (I'm speculating that
it is FSL FLIRT). You could download just the new bbregister and
mri_coreg to your VM and see if it works.
On 6/2/2020 6:40 AM, Mason Wells wrote:
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I am using version 5.3, this is the
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I am using version 5.3, this is the version on the virtual machine I am working
from. I can ask about an updated version, but is there a way to fix this on
v5.3 in the meantime?
Mason T Wells, MSc
PhD student
School of Optometry and Vision Sciences
&
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Dear freesurfer experts,
I found the same problems with recon-all (segmentation failure) using a Mac OS
Sierra (10.12) and the same failures (more than 10% of cases) with the command:
recon-all -base template -tp subj001 -tp subj002 -all
Hope it is
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