Re: [Freesurfer] Error sending tcl command

External Email - Use Caution Hi Expert, I am trying to render the surface maps using tksurfer command in the freesurfer VDI. The data was rendered on the brainmask , however the options for this maps are not appeared (as shown in the figure).

Re: [Freesurfer] tk applications failing to launch on VM (Windows)

External Email - Use Caution Hello Chris, I think tksurfer has been deprecated as newer versions of freeview can be used instead. A search thru the freesurfer support mail list for tksurfer brings up several posts including these, [Instead of tksurfer] you can also use tkmeditfv

Re: [Freesurfer] Password

External Email - Use Caution Hello Satya, I will send the password to your email directly. - R. On Oct 14, 2020, at 15:49, Satya Kothapalli satya...@gmail.com wrote:External Email - Use CautionHi, I wanted to try out FreeSurfer and followed the install guide from

[Freesurfer] Creating ROI from sig.mgh

External Email - Use Caution I have run a vertex based gyrification index analysis. Now I want to create a mask/ROI from the cluster of vertices which are above the threshold of 3 in sig.mgh file (p<0.001). Which command should I use for this purpose? Is it mri_mask? or

[Freesurfer] tk applications failing to launch on VM (Windows)

External Email - Use Caution Hi, I run Freesurfer remotely on Ubuntu, and locally on my Mac, so I’ve not had this problem personally. Two students are working remotely with PCs and are using the VM installation you folks provided

[Freesurfer] Reliability and sensitivity of two whole-brain segmentation approaches − ASEG and SAMSEG

External Email - Use Caution A new pre-print paper comparing two FreeSurfer’s whole-brain segmentation methods - ASEG and SAMSEG is now available (see the link below). The study is of great interest to many researchers in the field, providing new insights and guiding the