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Dear FreeSurfer experts
Just a gentle reminder!
Please do help me to resolve this issue.
With regards
Korann
On Thu, Nov 19, 2020 at 11:54 AM vittal korann
wrote:
> Dear FreeSurfer experts
>
> This is just a gentle reminder for my query!
> Looking
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Hi FreeSurfer experts
Recently I started working on the longitudinal data.
I followed the pipeline described in the below link.
Also, I attached my longitudinal table along with freesurfer data.
https://secure-web.cisco.com/10GeKQWbNwmdQQgtn3lkt2V_V6C
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Hi Bruce,
No, I don’t think that you’ve misunderstood. I was asking about cohorts
that had not been visually inspected in my first message and then in my
last message I wanted to check that I didn’t need to also remove people
from visually inspected da
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Hi PETSURFERs,
A quick question to the group: Does any one have experience using PETSURFER on
dynamic AV1451 scans? How can I know whether the MRTM1 or MRTM2 using midbrains
(due to off target AV1451 binding) is suitable for my data?
Thank you!
Best
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Dear FS team,
Does anyone have any idea how long does the permutation computation to handle
multiple comparisons take on a surface based analysis? The command is given
below:
mri_glmfit-sim --glmdir rh.project.glmdir --perm 1000 3 abs --cwp 0.05
-
Hi Stephanie
I see. Yes, I guess this is ok, you just want to be careful when tossing
datasets that you aren’t biasing your results. Always better to look at them if
you can. Big errors are pretty obvious and can be found quite rapidly (e.g. by
zipping through a bunch of snapshots with nmovie_q
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Dear all,
How can I easily scale the mgx.ctxgm.nii.gz files with the whole brain mean
intensity using PETSufer? Is there a command to use in mri_gtmpvc like
--rescale X?
I know that I can find the mean in global.gm.dat and I can use that value
for sca
Hi Lunhao,
Interesting. Can you provide some details on the configurations where this
worked? Were you using the same linux subsystem and windows versions?
thanks
Andrew
From: on behalf of Shen Lunhao
Reply-To: FS Help
Date: Friday, November 20, 2020 at 2:44 AM
To: FS Help
Subject: [Freesu
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Hi, Douglas
Sorry to bother you again, do you think the problem is the old version of
FSL?
Best,
Wei
On Fri, Nov 13, 2020 at 1:32 PM Wei Shao
wrote:
> Hi Douglas
>
> I think it's 5.0.11
>
> [weishao@gra-login2 ~]$ module load nixpkgs/16.09 freesur