Re: [Freesurfer] [WARNING: ATTACHMENT UNSCANNED]Re: Freeview error on centos7

I had no problem loading these files. Maybe it’s the surface file? Can you also send the surface file? On Mar 14, 2022, at 8:20 PM, Wen Wen mailto:wenw2...@gmail.com>> wrote: External Email - Use Caution Hi Ruopeng, Thank you for your reply. Please see attached. Visualizing problems

Re: [Freesurfer] Custom Freeview Color Map (not Lookup Table)

The stock colormaps are hard-coded. I can add an option to load custom color map. On Mar 14, 2022, at 11:58 AM, Keator, David (Psychiatry & Human Behavior) mailto:dbkea...@hs.uci.edu>> wrote: External Email - Use Caution Hi Ruopeng, I have the colormap I’m interested in using. It’s

[Freesurfer] [WARNING: ATTACHMENT UNSCANNED]Re: Freeview error on centos7

External Email - Use Caution Hi Ruopeng, Thank you for your reply. Please see attached. Visualizing problems happen exclusively for the 1mm volume file and surface data. wen Shen268_1mm_Proportion.nii

Re: [Freesurfer] Freeview error on centos7

Would it be possible to send us the volume and the surface files so that we can try to replicate the issue? Thanks, Ruopeng On Mar 14, 2022, at 12:01 PM, Wen Wen mailto:wenw2...@gmail.com>> wrote: External Email - Use Caution Dear Freesurfer experts, I’m running Freeview on a

[Freesurfer] Freeview error on centos7

External Email - Use Caution Dear Freesurfer experts, I’m running Freeview on a centos7 computer and having the issue of loading surface data and 1mm volume data. The error message is *Segmentation fault (core dumped).* This issue remains no matter I work locally or remotely.

Re: [Freesurfer] Custom Freeview Color Map (not Lookup Table)

External Email - Use Caution Hi Ruopeng, I have the colormap I’m interested in using. It’s a 256 colormap with RGB values. I could save it as a binary colormap if I know the precise format or an ascii formatted colormap. Thanks, Dave From: on behalf of "Wang, Ruopeng"

[Freesurfer] Developmental neuroimaging postdoc positions

External Email - Use Caution The Department of Radiology in the Cumming School of Medicine at the University of Calgary is accepting applications for two Postdoctoral Scholar positions in Developmental neuroimaging and Computational modeling of mental illness risk. Both are 2-year

[Freesurfer] bug: freeview's "configure overlay" window frozen (Ubuntu18 in wsl2 on Windows 11)

External Email - Use Caution Dear Freesurfers, I just installed Freesurfer (freesurfer-linux-ubuntu18_x86_64-7.2.0-20210721-aa8f76b) on Ubuntu (Ubuntu 18.04.6 LTS) running in Windows 11's wsl2. So far Freeview is running fine-I can load volumes and surfaces, and add an

Re: [Freesurfer] Custom Freeview Color Map (not Lookup Table)

There isn’t a way to do that at the moment. So you want to use a continuous spectrum with 256 color stops as the color map? Ruopeng On Mar 11, 2022, at 6:06 PM, Keator, David (Psychiatry & Human Behavior) mailto:dbkea...@hs.uci.edu>> wrote: External Email - Use Caution Hi, I’d like

Re: [Freesurfer] Linear mixed model for longitudinal data

External Email - Use Caution Hi Julian, Am 11.03.2022 um 11:06 schrieb Julian Macoveanu mailto:julian.macove...@gmail.com>>: External Email - Use Caution Dear Kersten, Thank you for your answer, I have some follow-up questions to the first two points before I can move