[Freesurfer] lh.pial and rh.pial is 0Kb, I cannot open them by using freesurfer

2022-03-24 Thread Muhammed Görünen
External Email - Use Caution Hi, I run recon-all process for a subject's T1 data. At the end, the pial files are 0Kb and I cannot open them from python. What would be the problem here? Also, is there any difference between pial file and pial.T1 file? I will be happy if you can

Re: [Freesurfer] [External] Re: [External] Re: classes for GLM analysis

2022-03-24 Thread Zeng, Victor (BIDMC - Keshavan - Psychiatry)
External Email - Use Caution It is seemingly working in matlab R2021b rather than matlab R2014a. Can you confirm this? Otherwise that should be noted in the wiki Get Outlook for

[Freesurfer] Question about calculation of pial area in DKatlas

2022-03-24 Thread Dongyue Zhou
External Email - Use Caution Dear FreeSurfer experts:I want to calculate mean pial surface area in DKatlas in individual space.And I know the function read_annotation.m in $FREESURFER_HOME/matlab for loading this atlas.And if I can load sub/surf/?h.area.pial as the area