Re: [Freesurfer] FreeView cannot open any images

2022-12-01 Thread Fischl, Bruce R.,PHD
Hi Greta Make sure you are in the "3D" view (the icon that looks like a little head next to the coronal/axial/sagittal ones) Cheers Bruce -Original Message- From: freesurfer-boun...@nmr.mgh.harvard.edu On Behalf Of Greta Tuckute Sent: Thursday, December 1, 2022 6:19 PM To:

[Freesurfer] FreeView cannot open any images

2022-12-01 Thread Greta Tuckute
Hello, I am attempting to use FreeView (have used it successfully for a few years, but suddenly it stopped working — cannot identify any cause. Have not updated operating system or similar). The problem is that nothing is loaded or shown. I cannot load e.g., an inflated LH surface from

[Freesurfer] ERROR: fast_mat2vol

2022-12-01 Thread stdp82
External Email - Use Caution I would extract the rs-fMRI timeseries from Yeo’s Network components. I’m running: preproc-sess -s ${1} -fsd rest -sliceorder up -surface self lhrh -fwhm 0 -per-runfcseed-config -wm -fcname wm.dat -fsd rest -pca -cfg wm.config fcseed-sess -s

[Freesurfer] [Tracula] ERRORS when using trac-all -prep

2022-12-01 Thread h21ms-utsumi
External Email - Use Caution Dear Freesurfer experts I'm attempting to running TRACULA in a two subjects(one visit per subject and multiple deffusion scans per visit), as described on the TRACULA tutorial