[Freesurfer] VM Password

External Email - Use Caution Hi, I'd like to request access to the Freesurfer VM. Thanks, Andrew Mao ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The

Re: [Freesurfer] using FS7.2 tracula with FS6.0 outputs

External Email - Use Caution Is this recommended or possible. We'd like to get the additional tracts from tracula 7.2 without having to rerun all the data from 6.0 (to which we made manual WM segmentation edits). Jim From: freesurfer-boun...@nmr.mgh.harvard.edu On Behalf Of

Re: [Freesurfer] ma_ca_register is not called anymore in version 7.3.2

Hi Kilian, Can you try adding '-careg'? Put it after "-autorecon2 -autorecon3". Best, Yujing -Original Message- From: freesurfer-boun...@nmr.mgh.harvard.edu On Behalf Of Kilian M Pohl Sent: Wednesday, December 7, 2022 10:50 PM To: freesurfer@nmr.mgh.harvard.edu Subject: Re:

Re: [Freesurfer] 7.3.2-patch issues - thalamic segmentation

Hi Katie, Thank you for pointing this out! Yes, please make changes to the core.py script in your '$FREESURFER/python/packages/freesurfer/subregions/' folder. I will update the patch instructions to reflect this as well. Best, Avnish From:

[Freesurfer] preproc-sess (AP-PA) - study design

External Email - Use Caution Hi, I have two basic questions. 1- I am currently having some AP fMRI runs and I have also acquired a single PA run to be able to do distortion correction, my original plan was to use FSL and apply topup to get the undistorted fMRI data. How can I