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To whom it may concern
> Would you please send me the password for unzipping the virtual box file?
Best
Neda
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Dear Experts,
My aim is to get circular ROIs. At the moment i am trying it on the flatmap,
and i am writing a matlab script to do the task. However, I am getting a
problem to open the output file (.flat) of the mris_flatten function as surface
in M
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what is the error you are talking about? The area around the stroke? In
theory, you could edit to WM where the WM is now gone, but you'd have to
wait for the next version of FS, and even then I'm not sure it would
work. Or are you talking about the pl
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what do you mean that you won't want to do any resampling? How else
would you apply a transform? Or do you mean that you want to use nearest
neighbor resampling (so no interpolation)? If so, you can use
mri_vol2vol with the --interp nearest option
O
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If you download the dev version, you can run something like this:
mri_binarize --dilate-vertex vtxno lh.white 10 lh.white.circle10.mgz
where vtxno is the vertex no where you want the circle to be centered,
10 is the radius of the circle in mm
It will n
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can you be more specific?
On 5/4/2023 1:34 PM, Rosalia Dacosta Aguayo wrote:
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Dear Freesurfer's experts,
Why is this happening?
Kind regards,
Rosie
*
*
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Why is the brain white?
I have been changing the thresholds and nothing seems to work...
Kind regards,
Rosie
On Thu, May 4, 2023 at 7:53 PM Douglas N. Greve
wrote:
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>
> can you be more specific?
>
> On 5/4/2
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I have solved the problem.
I had trouble with skull stripping and the solutions given by FreeSurfer
did not seem to work on my image, part of its skull was glue attached. Thus
I used FSL to solve the problem and the values inside the mask are
different