Re: [Freesurfer] Freeview output viewing error

External Email - Use Caution  If you search the freesurfer mail archives for WSL you should find postings about how to setup an  X-server on the windows host in order for Linux applications to run in WSL and use X-Windows to display images.   We provide some documentation, howev

Re: [Freesurfer] Easyreg > cortical parcels missing after SynthSeg with --parc option ?

External Email - Use Caution Dear Eric, Thanks for the interest in our tool! Can you please send us the exact command line that you used, and the full output of mri_easyreg? Cheers, /Eugenio -- Juan Eugenio Iglesias http://secure-web.cisco.com/1U33kJUEZ__sfspXazQKQX0hyZheFOuaPY4

[Freesurfer] Job Position: Postdoc Research Associate at the Center for Healthy Minds

External Email - Use Caution The Center for Healthy Minds at the University of Wisconsin–Madison

[Freesurfer] How to register single voxel spectroscopy VOI to FreeSurfer processed brain

External Email - Use Caution Dear FreeSurfer, I am trying to extract tissue composition of %GM, %WM, and %CSF from a Freesurfer processed brain. I have the coordinates for the voxel but do not know how to place a voxel on the brain in FreeSurfer before running mri_compute_volum

Re: [Freesurfer] T2 FLAIR Images

External Email - Use Caution Sorry, you need to pass it to recon-all with --flair or --T2 On 8/21/2023 1:19 PM, Alan Francis wrote: External Email - Use Caution Hi Doug: Thanks for your reply. I am trying to set the T1.nii.gz as 001.mgz and the T2.nii.gz as 002.mgz. S

[Freesurfer] Password for unzipping Virtual Box Image file

External Email - Use Caution Hi, I would like to request the passcode for unzipping the Virtual Box Image file (i.e. FS_7_2_0_ubuntu_18_04_06.ova.7z). Best regards, Michalis ___ Freesurfer mailing list Freesurfer@nmr.mgh.harv

[Freesurfer] Easyreg > cortical parcels missing after SynthSeg with --parc option ?

External Email - Use Caution Hello Freesurfer Developpers, I attempted to run mri_easyreg (Freesurfer 7.4) between two MP2RAGE UNI images (acquired on a SIEMENS PRISMA 3T). First, I did not include segmentations, as I understood that EasyReg would run it for me. But it didn't.