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We don’t expect things to work reliably with 8G total RAM for the machine.
The host machine itself will always consume some memory when running its
OS, probably up to a few Gig, leaving even less than 8G to be used for
running the VM with freesurfe
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Dear FreeSurfer community and experts,
I would greatly appreciate any help/response with the following.
Thanks.
-- Forwarded message -
From: Martin Juneja
Date: Wed, Jan 31, 2024 at 7:51 PM
Subject: Vertex / voxel lesion symptom mapp
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Hi,
We are trying to do % signal change within a ROI. However, when we run
funcroi-sess function (after funcroi-config), we get following output in
terminal
set: variable name must begin with a letter
When we run the function with -debug, we saw th
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OK perfect, thank you so much for the clarification!
Kind regards Linn
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Fischl, Bruce R.,PHD
Sent: 06 February 2024 15:35:16
To: Freesurfer support list
Sub
Hi Linn
The text you cite is how we measure it. It is the signed distance each points
moves to get from the white to the inflated surface, where outwards movement is
positive (along the surface normal direction) and inwards distance is negative.
Cheers
Bruce
From: freesurfer-boun...@nmr.mgh.ha
I can’t reproduce the error here with FS 6.0. Not sure where you downloaded the
script. Can you run this “tcsh -x $FREESURFER_HOME/bin/mri_glmfit-sim –help”?
I’m hoping it will give some hints.
Best,
Yujing
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Sven Kühn
Sent: Sunday, Feb
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Hello FreeSurfer Developers,
I am attempting to start Ubuntu via VirtualBox 7.0 on Windows 10. But I
have few problems.
First, I do not have the access to the compressed VM Image file
(FS_7_3_2_course_ubuntu_18_04_06.ova.7z), is it still possible
Not sure where this happened. Does it produce any log files that you can share?
Maybe both logs with and without the -nomc option.
Best,
Yujing
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Stefano Delli Pizzi
Sent: Saturday, February 3, 2024 2:33 PM
To: freesurfer@nmr.mgh.harvard
It looks like your recon-all was killed. Is it possible that your recon-all ran
out of the job limit (time, memory, ...).
I also noticed you have these options to recon-all '-3T -no-isrunning'. Make
sure you don't have other instance of recon-all running on the same subject.
Best,
Yujing
From
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Dear experts,
I am assessing different morphological aspects of the cortex including sulcal
depth but am struggling to understand how this is calculated in FreeSurfer. I
see that a previous correspondence
(https://secure-web.cisco.com/130Tf81zvPk_60
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Hello Freesurfer Gurus,
Is it possible to obtain "wmparc" but for the DKT cortical atlas, please?
Many thanks.
Best wishes,
Hamied
Dr Hamied A Haroon [he/him/his], MSc, PhD, MInstP
Research Fellow in Quantitative Biomedical MR Imaging
The Universi
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