Hi Freesurfer Developers,
I would like to ask for your expertise in the following problem I encountered:
I want to create subject specific labels based on a label I created in
fsaverage. The transformation needs to be based on Talairach intermediate
registration, since my label was drawn based
colorwheel and I also read in a freesurfer discussion, that its
values are in radian.
Your help is really appreciated.
Thanks a lot and best
Agoston
Date: Thu, 27 Aug 2015 12:08:32 +
From: Agoston Mihalik
Subject: [Freesurfer] fsig.nii with rtview
To: "freesurfer@nmr.mgh.harvar
Dear Freesurfers
I started using rtview to be able to delineate regions in my retinotopy data,
however, I ran into problem with the fsig.nii file. I do my analysis in SPM, so
I create the sine, cosine and significance images there as follows:
The sine and cosine images are regressors (parametri
line in that file and see if it matches the
first line in the old one? Something might have gotten added by the mail program
On 08/07/2014 11:25 AM, Agoston Mihalik wrote:
> I start tcsh automatically when opening the terminal window.
>
> Anyway, typing 'tcsh mri_mergelabels' t
] bblabel
Try running
tcsh mri_mergelabels
On 08/07/2014 05:21 AM, Agoston Mihalik wrote:
> Hi Doug
>
> I copied the new script into $FREESURFER_HOME/bin and made it executable, but
> unfortunately it throws the following error to the Terminal:
> axm676% mri_mergelabels
>
marks and interprets them as wildcards (like *) for file names, but it
cannot find such files and it it dies. I've attached a new mri_mergelabels
script which should fix the problem. Copy it to $FREESURFER_HOME/bin (you may
need to make it executable) doug
On 08/06/2014 08:53 AM, Agoston Mih
N Greve
Sent: 05 August 2014 23:01
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] bblabel
Can you send the full terminal output? Are you sure that there is something in
the .label file?
On 08/05/2014 08:47 AM, Agoston Mihalik wrote:
>
> Dear All
>
> I have problems usi
Dear All
I have problems using bblabel and would like to ask for expertise.
At first, I tried to make a coronal cut in the following way:
'bblabel --l lh.DLPFCsd.label --o lh.out.label --ymin 26'
I got a runtime error with:
'echo: No match'
Then I used the example in bblabel help:
'bblabel --l
