Hello all,
I segmented a brain with FreeSurfer and I am very satisfied about the
result.
After that I visualized the T1.mgz together with the white surface in
TkMedit.
Now I am looking for interesting anatomical structures. My goal is to assign
vertices in the white surface at the
Dear experts,
I got BEM surfaces out of the BET tool from the FSL package. The surface
files are in nifti format (*.nii.gz).
Now I wonder if there is any opportunity to convert nifti surfaces to
FreeSurfer surface in surf format (*.surf)?
I appreciate any hint.
Thank you so much in advance.
Dear experts,
Currently I am playing around with the mri_watershed algorithm. After
processing the T1.mgz from bert I got 256 COR files plus the COR-.info
with the direction cosine information.
mri_watershed -surf -useSRAS $SUBJECTS_DIR/bert/mri/T1.mgz
$SUBJECTS_DIR/bert/bem/
Output in
