e the boundaries of a 2-3mm structure when
your slices are 3mm
On 11/10/2021 10:55 AM, Castro Leal, Gonzalo wrote:
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I have tried, but I get the following error:
local: Gonzalo_ADNI_sub-020S0899_T2.tar.gz remote:
Gonzalo_ADNI_sub-020S0899_T2.tar.gz
421 Servic
quot; (no quotes)
cd transfer/incoming
binary
put subject.tar.gz
Send an email that the file has been and the name of the file.
On 11/10/2021 9:33 AM, Castro Leal, Gonzalo wrote:
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Sorry I did not explain myself well. For some regions of the brain this is wh
question?
On 11/9/2021 1:33 PM, Castro Leal, Gonzalo wrote:
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The time of the aparc.stats is 1h and 20min after the modification of the file
pial.T2, and in the case of the T1 only processing the time stamp on the
apar.stats is 20 min after the modification of
you were confused as to why the thickness and
volume were changing but the surface was not changing. Then you said that the
pial surface changed. Does that answer your first question?
On 11/9/2021 1:33 PM, Castro Leal, Gonzalo wrote:
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The time of the
the stats files regenerated? Check the modification date
On 11/9/2021 10:41 AM, Castro Leal, Gonzalo wrote:
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Yes the pial surface changed and the white did not.
De:
freesurfer-boun...@nmr.mgh.harvard.edu<mailto:freesurfer-b
: Re: [Freesurfer] T1 aparc.stats vs T1 with T2 aparc.stats
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The white surface won't change, but the pial surface should change. Can you
verify that the pial surface changed?
On 11/9/2021 9:36 AM, Castro Leal, Gonzalo wrote:
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Hello,
I wanted to compare the results of the aparc.stats on the same subjects when
only the T1 is used and when T2 is used for pial refinement along with the same
T1. To my surprise the tickness increased (on average across regions), the gm
volume
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Dear Freesrufer Developer,
I have noticed that the ubuntu edition has not been updated since 05/10 (dd/mm)
and the issue with the synthsr tool is later to that. However, there is a
python script named mri_SynthSR that on the centos version is synthsr
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Hello FreeSurfer,
I am trying to run the following comand:
:~$ synthsr --i $SUBJECTS_DIR/super_resolve/ --o $SUBJECTS_DIR/super_resolved/
--ct --threads 4 --cpu
synthsr: command not found
Is this due to the synthsr being broken or with my installat
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Dear Freesurfer,
I was wonderign wether processing scans and comparing their stats, e.g.
cortical thickness and area, could be not recommended if the pixel spacing
across all the scans was different, i.e. the range is between .9375x.9375x1.2
and 1.3
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