[Freesurfer] fsPALM - Path Issue?

2019-09-19 Thread Harikumar, Amritha
Hello, I had emailed the Freesurfer Forum a few weeks back about trying the PALM analysis for permutation testing. I recently tried fsPalm again on running some of our subcortical analyses for the caudate, putamen, and nucleus accumbens, and we performed the following steps: * Set our res

[Freesurfer] PALM Analysis

2019-09-04 Thread Harikumar, Amritha
line so it is more specific > than "Re: Contents of Freesurfer digest..." > > > Today's Topics: > > 1. OHBM International Mentoring Programme Sign-up {Disarmed} > (Meena M. Makary) > 2. PALM Analysis (Harikumar, Amritha) > 3. Re: PALM

[Freesurfer] PALM Analysis

2019-09-02 Thread Harikumar, Amritha
Hi there, I am trying to run a Permutation Analysis of Linear Models (PALM) for analyzing subcortical areas in the nucleus accumbens, caudate, and putamen. Upon trying to run the script after reading the Freesurfer wiki, I am not sure what it is referring to regarding applying fsPalm in MATLAB.