Hello, My name is Ittai and I am currently working on my M.Sc. in the department of Neurobiology in Tel Aviv University. I am a new FreeSurfer user.
My question regarding the software is- After successfully running my data (T1 image - MPRAGE) through FS, I would like to extract both cortical surfaces (adjacent to pia and white matter) to Matlab. Is there a simple method of extracting these surface data to Matlab? or converting them to a format that is compatible with Matlab? I would greatly appreciate any help in this matter. Thanks in advance, Ittai Shamir
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