Re: [Freesurfer] Error in mris_convert thickness file from ascii format

2019-07-05 Thread Jee Su Suh
External Email - Use Caution Hi Bruce, I obtained the curv vector and used read_surf.m to get the face lists in lh.inflated for fsaverage. If the faces list was generated as a 327680x3 double, would it be correct to say that the number of faces is 327680 as the input argument for

Re: [Freesurfer] Error in mris_convert thickness file from ascii format

2019-07-04 Thread Jee Su Suh
e help for mris_convert, you'll see this example: Convert a scalar overlay file in "curv" format to ascii: mris_convert -c lh.thickness lh.white lh.thickness.asc which you should follow cheers Bruce On Wed, 3 Jul 2019, Jee Su Suh wrote: > > External Email - Use Caution

[Freesurfer] Statistical questions re: mri_glmfit and Monte Carlo sim corrections

2019-06-04 Thread Jee Su Suh
External Email - Use Caution Hello FreeSurfer community, I am struggling to explain a statistical inconsistency in vertex-wise GLM results I've obtained, corrected using the Monte Carlo simulations, the details of which are as follows: I have 181 subjects in Group 1, and 95 subje