Re: [Freesurfer] Visualization of FreeSurfer overlays in the HCP format

2020-06-19 Thread Katsumi, Yuta
Cheers Bruce -Original Message- From: freesurfer-boun...@nmr.mgh.harvard.edu On Behalf Of Katsumi, Yuta Sent: Friday, June 19, 2020 9:42 AM To: Freesurfer support list Subject: Re: [Freesurfer] Visualization of FreeSurfer overlays

Re: [Freesurfer] Visualization of FreeSurfer overlays in the HCP format

2020-06-19 Thread Katsumi, Yuta
R. > > Matt. > > From: on behalf of "Katsumi, Yuta" > Reply-To: Freesurfer support list > Date: Thursday, June 18, 2020 at 10:43 PM > To: Freesurfer support list > Subject: Re: [Freesurfer] Visual

Re: [Freesurfer] Visualization of FreeSurfer overlays in the HCP format

2020-06-18 Thread Katsumi, Yuta
HCP format External Email - Use Caution What kind of data does one display in an “OVERLAY” file? Matt. From: on behalf of "Katsumi, Yuta" Reply-To: Freesurfer support list Date: Thursday, June 18, 2020 at 5:43 PM To: Freesurfer support list Subject: [Freesurfer] Visualization of FreeSu

[Freesurfer] Visualization of FreeSurfer overlays in the HCP format

2020-06-18 Thread Katsumi, Yuta
Dear FreeSurfer community, I would like to be able to display OVERLAY files generated in FreeSurfer on a surface in the HCP’s Workbench (e.g., on fs_LR surf.gii). The HCP team states in their documentation (https://wiki.humanconnectome.org/display/PublicData/HCP+Users+FAQ#HCPUsersFAQ-9.HowdoIma

[Freesurfer] single-trial analysis of BOLD data in FSFAST

2020-01-08 Thread Katsumi, Yuta
Dear Doug, I would like to perform GLM on a trial-by-trial basis in FSFAST. That is, I'm interested in obtaining beta estimates per trial and using them as input for group-level analyses of activation patterns (e.g., MVPA) or functional connectivity (e.g., beta series correlations). I've done t