[Freesurfer] brain.finalsurfs.mgz editing

2014-01-16 Thread Khadka, Sankalpa
Dear freesurfer community, My question is directed to those who have experience with editing brain.finalsurfs.mgz. According to the tutorials, after making edits on brainmask.finalsurfs.mgz (which is normally done when the pial surface is not accurate), we can run, recon-all -autorecon-pial -

Re: [Freesurfer] Freesurfer Editing Strategy

2013-08-26 Thread Khadka, Sankalpa
rd.edu] Sent: Monday, August 26, 2013 10:08 AM To: Khadka, Sankalpa Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Freesurfer Editing Strategy Hi Sankalpa you need to edit the volume that is the input to mris_make_surfaces. You can double-check in the recon-all.log, b