Re: [Freesurfer] Data sets with enlarged ventricles

pretty well > > cheers > Bruce > On Thu, 26 Jul 2018, Khoi Mai wrote: > > >> External Email - Use Caution >> >> Hello, >> We are trying to run two subjects through recon-all. The kicker is that >> these two have very large >> ventricles and we

Re: [Freesurfer] Recon-all with custom atlas

External Email - Use Caution From what I read in the gctrain --help, does it only require talairach_man.xfm and the manual segmentation files? Does it require anything else for each subject? On Thu, Apr 19, 2018 at 12:39 PM, Douglas N. Greve wrote: > If

[Freesurfer] Freesurfer for canine

Hi, I am interested in the automated volumetric analysis for canine. My question is how can we go about adjusting the pipeline to accommodate canine data. Thank you for your reply Best, Khoi ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu