[Freesurfer] version 5.2 white surface bug

2013-05-08 Thread Luigi Angelo Maglanoc
Dear Freesurfer experts, I have recently read the thread about issues with version 5.2 concerning white surface and pial surface http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg28340.html All of the structural data has been through the longitudinal processing stream using

[Freesurfer] longitudinal processing of one timepoint

2013-02-13 Thread Luigi Angelo Maglanoc
Dear FreeSurfer experts, I know that it is possible to submit data with only one timepoint into the longitudinal stream with FreeSurfer 5.2. My question is, what is the exact command? is it: 1) recon-all -base templateid -tp tp1id -all or 2) recon-all -base templateid -tp tp1id -tp tp1id -allI