Hi,
I'm responding to this archived email:
https://mail.nmr.mgh.harvard.edu/pipermail//freesurfer/2012-May/023599.html
Is it possible to run recon-all with the switch -nowmsa to get rid of the
white matter segmentation analysis?
Thanks!
Mary Ellen Koran
MD/PhD Candidate, MSTP
Thornton-Wells
Hi,
I'm getting the error
WARNING: tag image orientation not found
during the mri_convert step of recon-all.
The log file is attached here.
I am using version freesurfer_v.5.1.0 on Linux RHEL6.
I am submitting a job to qsub (command lines in script FSscript3 attached).
Any help would be greatly
