Re: [Freesurfer] mri_glmfit-sim error CSDs have the same seed

tput than that. > Try this, delete the CSD files: > rm lh.rs6980093.thickness10.glmdir/csd/perm.th20.abs.j*-osgm.csd > Then re-run. If it fails, then send me the perm.th20.abs.j*-osgm.csd files > > On 9/14/2020 2:58 PM, Meaghan Perdue wrote: > > External Email - Use Caut

Re: [Freesurfer] mri_glmfit-sim error CSDs have the same seed

the full command line and terminal output > > On 9/9/2020 3:19 PM, Meaghan Perdue wrote: > > External Email - Use Caution > Hello Freesurfer experts, > > We're receiving the following error message when trying to run > mri_glmfit-sim: > ERROR: CSDmerge: CSDs have s

[Freesurfer] mri_glmfit-sim error CSDs have the same seed

to run the simulation successfully on LH surface area and RH thickness and area. How can we troubleshoot this problem? Thank you, Meaghan Perdue -- Meaghan Perdue she | her | hers PhD Student Developmental Psychology Neurobiology of Language University of Connecticut Bousfield A302 Visit my webs

[Freesurfer] mri_glmfit contrast matrix for regression 2 factors 2 levels 2 covariates

w MaleCBIC 7.27287 24 Input sub-NDARCW932EU6run-01_new MaleCBIC 9.17842 37.5 Input sub-NDARDA656RBNrun-01_new MaleCBIC 7.07849 16.5 Input sub-NDARDB720VEArun-01_new MaleCBIC 8.95996 16 Thank you! Meaghan -- Meaghan Perdue she | her | hers PhD Student Developmental Psychology Neurobiology o

[Freesurfer] Job Opening: Research Associate Haskins Laboratories

, language, reading, and their biological basis. Haskins has long-standing, formal affiliations with the University of Connecticut and Yale University. Haskins Laboratories is an Equal Opportunity Employer. -- Meaghan Perdue PhD Student Developmental Psychology Neurobiology of Language University of

[Freesurfer] Postdoctoral Fellowship: Neurobiology of Reading {Disarmed}

ocations. Interested candidates should send 1) a CV; 2) the names and contact information of three references; and, 3) a cover letter to Dr. Nicole Landi at *nicole.la...@uconn.edu * . This position will remain open until filled; desired start date is Spring 2019. Salary will be commensurate with NIH

[Freesurfer] Recon-all crash at Talairach

-iters 1000 --distance 50 --no-rescale --i orig.mgz --o orig_nu.mgz \n The command I've used to initiate recon all is: recon-all -all -s sn9885 -i sn9885.nii.gz -cw256 -qcache Any advice for trouble-shooting this? Many thanks! Meaghan Perdue -- Meaghan Perdue PhD Student Developm

[Freesurfer] Postdoctoral Fellowship in Neuroimaging (MRI & DWI)

ship-neuroimaging-mri-and-dti>* Best regards, Meaghan Perdue -- Meaghan Perdue PhD Student Developmental Psychology Neurobiology of Language University of Connecticut Bousfield A302 ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https:/

[Freesurfer] POSTDOCTORAL FELLOWSHIP IN NEUROIMAGING (MRI and DTI)

External Email - Use Caution *POSTDOCTORAL FELLOWSHIP IN NEUROIMAGING (MRI and DTI)* The LandiLab (PI: Nicole Landi, PhD *https://landi.lab.uconn.edu/

Re: [Freesurfer] intensity normalization and GM exclusion

r. If you upload a subject I > can try it out and see if I can improve things and get back to you. > > cheers > Bruce > > > > On Wed, 22 Mar 2017, Meaghan Perdue wrote: > > >> Hello, >> >> I attended the September 2016 Freesurfer training c