Re: [Freesurfer] regress out signal

External Email - Use Caution thank you for replying. Sometimes I meet the problem that the document says that Tr is 3s but when I use make-analysis it says that the file is 2.2s and then it could not work. How to solve this problem? Best regards Mingyang Xia Douglas N. Greve 于

[Freesurfer] regress out signal

t nuisance. Thank you Mingyang Xia ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you be

Re: [Freesurfer] fmcpr.up.sm5.mni305.2mm.nii.gz label

ask, there > should be a mask in the mask folder > > On 5/23/2022 10:05 PM, Mingyang Xia wrote: > > External Email - Use Caution > Dear Freesurfer expert: > I am Mingyang Xia. I use freesurfer to preprocess the fmri data and map > to the fsaverage and generat

[Freesurfer] fmcpr.up.sm5.mni305.2mm.nii.gz label

External Email - Use Caution Dear Freesurfer expert: I am Mingyang Xia. I use freesurfer to preprocess the fmri data and map to the fsaverage and generate a file named fmcpr.up.sm5.mni305.2mm.nii.gz. I want to get the label of this file however I could not find the label in the

Re: [Freesurfer] preproc-sess fmri image to self surface

External Email - Use Caution The command I used is in load_untouch_nii.png and the dimension shown in this file is in the dimension.png. It seems that the dimension used matlab command is 1*1*1*120. Thank you Mingyang Xia On Thu, May 27, 2021 at 3:00 PM Douglas N. Greve wrote

Re: [Freesurfer] dim of fmcpr.up.sm5.self.lh.nii.gz

you sure those are the dimensions? They do not look right. It should > be something more like ~12x1x1x120 > Try running > mri_info --dim fmcpr.up.sm5.self.lh.nii.gz > > On 5/18/2021 1:26 PM, Mingyang Xia wrote: > > External Email - Use Caution > Dear freesurfe

[Freesurfer] preproc-sess fmri image to self surface

External Email - Use Caution Dear freesurfer expert: My name is Mingyang. I want to preprocess fmri image and map the timepoints to its corresponding T1 surface. However, when I use preproc-sess command, it seems that the output image has the wrong dimensions. Could you give me

[Freesurfer] dim of fmcpr.up.sm5.self.lh.nii.gz

cpr.up.sm5.self.lh.nii.gz is 1*1*1*120. However, when I apply it to the fsaverage. It has correct dimensions. Could you tell me why it happens? Thank you Mingyang Xia ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.e