[Freesurfer] periaqueductal gray

External Email - Use Caution Hi, Just wondering if the periaqueductal gray is part of the automatic segmentation process and if we can obtain the volume. I checked the aseg table but didn't see it, however, I somehow remember seeing it before... Was it ever included? Thanks. _

Re: [Freesurfer] Regenerate Qcache without Recon-ALL

] Regenerate Qcache without Recon-ALL no, you can just run with -qcache for each subject. Don't include -all or -autorecon2 or anthing, just subject id and -qcache. It should be fast On Wed, 11 Jul 2018, Mr. Tass wrote: > > External Email - Use Caution > > Hello > > ju

[Freesurfer] Regenerate Qcache without Recon-ALL

External Email - Use Caution Hello just a quick question i didn't run recon-all using the -qcache do i have to start all over ? 😢 the initial run took a week Please advise if there is a way to fix that without having to restart recon-all again thank you ___

Re: [Freesurfer] recon-all -s 1 exited with ERRORS

External Email - Use Caution make sure u have 8gb if ram at least Get Outlook for Android From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Bernardo Regal Sent: Wednesday, July 4, 2018 12:56:14 PM To: Freesurfer

[Freesurfer] Volumetric Group Analysis

External Email - Use Caution Good morning I hope everyone had a gr8 weekend. im new here so i hope someone can help me understand a little about the right way to use freesurfer in order to calculate the gray matter volume for different areas of the brain and compare the volume b