[Freesurfer] mri_glmfit

External Email - Use Caution Dear FS group, I would like to restrict mri_glmfit analysis, on FS-FAST outputs, to the cerebellum. Thus, I’m using —mask, adding the mask of cerebellum. To this aim I can obtain it using mri_binarize. Do you agree? mri_binarize --i ... --match 8 --o L

[Freesurfer] 5th order polynomial

External Email - Use Caution Hi list, FS-FAST guidelines reports this example for seed-based FC analayis: mkanalysis-sess -analysis fc.lpccseed.surf.lh -surface fsaverage lh -fwhm 5 -notask -taskreg L_Posteriorcingulate.dat 1 -nuisreg vcsf.dat 5 -nuisreg wm.dat 5 -mcextreg -poly

[Freesurfer] Map the vertices that show a relationship between the FC (obtained by FS-FAST)

X2 g4 ... -- intercept.mtx 0.25 0.25 0.25 0.25 0 slope.mtx 0 0 0 0 1 thanks piero Piero Chiacchiaretta, PhD Institute for Advanced Biomedical Technologies - ITAB - University “G. d’Annunzio” of Chieti - Pescara Department of Neuroscience, Imaging and Clinical Sciences Via dei Ve

Re: [Freesurfer] Information on FS-FAST

/CerebellumParcellation_Buckner2011)? Have you alternative way or any suggestion? Best regards Piero Piero Chiacchiaretta, PhD Institute for Advanced Biomedical Technologies - ITAB - University “G. d’Annunzio” of Chieti - Pescara Department of Neuroscience, Imaging and Clinical Sciences Via dei Vestini, 31 66013

[Freesurfer] Information on FS-FAST

Hi list, 601-628 labels in FreeSurferColorLUT or labels obtained by Buckner’s parcellation could be used in FS-Fast to assess the FC of each subfield? The labels should be spatially registrated in a specific space before to procede with FS-FAST? Thanks in advance, Piero Piero Chiacchiaretta