[Freesurfer] A Question about fcseed-config in larger parcellation

External Email - Use Caution Dear FreeSurfer experts, I want to calculate functional connectivity analysis with 400 parcel, we divided the parcellation with "mirs-divide-parcellation" before, now I want to know when I use "fcseed-config" to obtain the seed signal, how can I se

Re: [Freesurfer] Fwd: fcseedcor output

is-sess commands, doesn't work. and bellow massage is appear in my terminal. --- matlab output > matlab: Command not found. How can I fix it and obtain connectivity matrix with fcseedcor? thank you with your help , sara -Original Message-

[Freesurfer] Fwd: fcseedcor output

External Email - Use Caution -Original Message- From: "Sara Jafakesh" To: freesurfer@nmr.mgh.harvard.edu Cc: dgr...@mgh.harvard.edu Date: Sat, 08 Dec 2018 22:25:20 +0330 Subject: Fwd: fcseedcor output -Original Message----- From: "Sara Jafake

[Freesurfer] Fwd: fcseedcor output

External Email - Use Caution -Original Message- From: "Sara Jafakesh" To: "Greve, Douglas N.,Ph.D." Date: Sat, 08 Dec 2018 12:21:06 +0330 Subject: Re: fcseedcor output hi, I send the entire email chain: Can? you send the full terminal output?

Re: [Freesurfer] fcseedcor output

problem. > I would be grateful if you could help me. > best regards, > sara Can? you send the full terminal output? On 12/05/2018 01:25 AM, Sara Jafakesh wrote: > > External Email - Use Caution Dear Dr.GREVE , thank you for your reply my full ter

[Freesurfer] fcseedcor output

External Email - Use Caution Dear Dr.GREVE , thank you for your reply my full terminal outpou is : [user@localhost subjects]$ fcseedcor -s subj1 -fsd rest -seed lh-seed2.dat -seed lh-seed3.dat -xreg wm.dat 5 -xreg vcsf.dat 5 -xreg mcprextreg 6 -hpf .001 -lpf .1 -nskip 6 -o seed

[Freesurfer] (no subject)

External Email - Use Caution Can? you send the full terminal output? On 12/05/2018 01:25 AM, Sara Jafakesh wrote: > > External Email - Use Caution > > > > > > > Dear freesurfer experts, > I want to calculate corr

[Freesurfer] Fwd: fcseedcor output

External Email - Use Caution Dear freesurfer experts, I want to calculate corrolation between two seeds with freesurfer-linux-centos6_x86_64_stable_pub-v6 .after using fcseed-config and fseed-sess , I used fcseedcor. the command that I trying to run is as follow: fcseedcor

[Freesurfer] fcseedcor output

External Email - Use Caution Dear freesurfer experts, I want to calculate functional connectivity between two seeds with freesurfer-linux-centos6_x86_64_stable_pub-v6 . after using fcseed-config and fseed-sess commands, I use fcseedcor command. the command that I trying to run i

[Freesurfer] (no subject)

External Email - Use Caution Dear freesurfer experts, I want to calculate functional connectivity between two seeds with freesurfer-linux-centos6_x86_64_stable_pub-v6 . after using fcseed-config and fseed-sess commands, I use fcseedcor command. the command that I trying to run i