Hi,
My bbregistration finished with the warnning"
---------------------------------------------------------------------------------------------
WARNING: initial G-W contrast was negative, but expected positive.
If the mov data has a T1 contrast, re-run with --T1
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and does not create subj_RS_register.dat file... I thought, it is only warning
so it should create the files. Here is the command, I run to do bbregistration,
where ${sub} is substituted by subject number:
--------------------------------------
bbregister --s ${sub}_FS --mov $main_path/$sub/${sub}.RS.mgz --reg
${sub}_RS_register.dat --init-fsl --bold --frame $framenum --nearest --o
${sub}.RS.template.mgz
-------------------------------------------------------------------------
Thanks
Priyank
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