I've been having problems with a few brains (errors during
processing). I found advice on the web about running BET (the FSL
brain extraction tool) prior to running recon-all
http://lcni.uoregon.edu/mediawiki/index.php/SOFT:FSL_FreeSurfer
I've tried this and that has helped. (Searching the
estimation. Do you find
our skullstripping is failing? In our hands the current version is
extremely robust - working on 99% of the brains we test.
cheers,
Bruce
On Thu, 13 Dec 2007, Simon Rushton wrote:
I've been having problems with a few brains (errors during
processing). I found
I feel somewhat uneasy simply assuming that the process worked just
because it didn't exit with an error. Is my concern misplaced?
Should I feel happy about submitting a ms based on freesurfer analyses
that have not been independently checked?
If it is necessary/advisable to do some indep
x27;t
stop in the middle to do so anymore.
Bruce
On Wed, 2 Jan 2008, Simon Rushton wrote:
I feel somewhat uneasy simply assuming that the process worked just
because it didn't exit with an error. Is my concern misplaced?
Should I feel happy about submitting a ms based on freesurfer