Re: [Freesurfer] trac-all inquiry

2013-08-09 Thread Soto, David
August 2013 23:15 To: Soto, David Cc: freesurfer@nmr.mgh.harvard.edu Subject: RE: [Freesurfer] trac-all inquiry When you apply a rotation to the DWIs (as eddy_correct does), you need to apply the same rotation to the corresponding gradient vectors. See for example: Leemans, A., Jones, D. K., Jun 2009

Re: [Freesurfer] trac-all inquiry

2013-08-07 Thread Soto, David
/medicine/people/d.soto/ From: Soto, David Sent: 07 August 2013 23:47 To: Anastasia Yendiki Cc: freesurfer@nmr.mgh.harvard.edu Subject: RE: [Freesurfer] trac-all inquiry Hi Anastasia, I checked the becs and bvals files, there was a bug in the transposition