Dear FreeSurfers
I am having some troubles to run step 4 of protocol to thickness
reproducibility. The error message is below:
nf04:~> mris_surface_stats -nsmooth 100 -surf_name
/home/nf04/subjects/t_pac01/su
>
> rf/lh.white -out_name
>
> /home/nf04/subjects/groupstudy/lh_std_60.mgh -absmean
> /home/nf04/subjects/groupstudy/lh_absmean_60.mgh -mean
> /home/nf04/subjects/groupstudy/lh_mean_60.mgh -absstd
> /home/nf04/subjects/groupstudy/lh_absstd_60.mgh
>
> /home/nf04/subjects/groupstudy/tpac02_lh_thicknes_diff_resampled_to_tpac01.mgh
> Perform 100 steps of smoothing of input data
> using /home/nf04/subjects/groupstudy/lh_std_60.mgh as output file
> using /home/nf04/subjects/groupstudy/lh_absmean_60.mgh as output file
> for
> abs-mean
> using /home/nf04/subjects/groupstudy/lh_mean_60.mgh as output file for
> mean
> using /home/nf04/subjects/groupstudy/lh_absstd_60.mgh as output file
> for
> std-of-abs-mean
> reading
>
> /home/nf04/subjects/groupstudy/tpac02_lh_thicknes_diff_resampled_to_tpac01.mgh...
> Smooth input data by 100 steps
> ERROR: MyMRISsmooth: Surf/Src dimension mismatch
> Stats over surface (76117 vertices): mean = 0.368766, std = 1.02826,
> absmean = 0.790395, absstd = 0.754038
>
> I would appreciate so much any help.
>
> Many thanks
>
Thiago Junqueira
Medical Physicist, Msc Student in Neuroimage
Neuroimage Lab and Medical Physics Lab
University of Campinas
Phone: +55 19 8809-9476
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