Bruce
>
>
> On Thu, 15
> Dec 2016, Vaz pandolfo, Renata wrote:
>
> > Dear FS experts,
> >
> > My colleagues and I are planning some projects and we were wondering if
> > there are any news on the release date of the FreeSurfer 6.0 stable
> version.
>
> > we are hoping it goes out in either late Dec or early-to-mid Jan, but of
> > course it depends on it passing lots of tests, so we can't say for sure
> >
> > cheers
> > Bruce
> >
> >
> > On Thu, 15
> > Dec 2016, Vaz pandolfo, Renata wrote:
&g
Dear FS experts,
My colleagues and I are planning some projects and we were wondering if
there are any news on the release date of the FreeSurfer 6.0 stable version.
We noticed that there was a new developmental version released today, is
that good news?
An approximation of whether it will be a m
m
> in Freeview), you should be fine and not need to do anything.
> Cheers,
> /E
>
> Juan Eugenio Iglesias
> Senior Research Fellow
> Translational Imaging Group
> University College London
> http://www.jeiglesias.com
> http://cmictig.cs.ucl.ac.uk/
>
>
>
Dear Eugenio,
We have another question about the Hippo Sf Segmentation with an additional
scan.
Some of our additional scans (FLAIRs or T2s) have a bigger field of view as
compared to the T1 (ex.: they cover more of the neck almost up to the
shoulders of the subjects, while the T1 has the "normal
yT2scan.nii.gz T2
>
> - FLAIR: recon-all -s mySubject -hippocampal-subfields-T1T2
> myFLAIRscan.nii.gz FLAIR
>
> Cheers,
>
> /Eugenio
>
> Juan Eugenio Iglesias
> Senior Research Fellow
> Translational Imaging Group
> University College London
> http://www.jeig
Dear FS experts,
I have a question about the "segmentation with an additional scan -
multispectral segmentation"
on the hippocampal sf segmentation, FS dev. 6.0.
For controls on which I had already run recon-all -all, I added the T2
sequence with the following
command:
recon-all -s \
-hippocam
Dear Eugenio,
I have a couple of questions regarding the hippocampus subfields
segmentation on the dev FS 6.0 which I hope you could help me with.
We are comparing the volumes of hippocampal subregions of patients and
controls, and we would like to be as consistent as possible with the input
so t
not ready and should not be used. As far as we
> know, there is not a link to 6.0 anywhere on our web pages. Where did you
> find it?
>
> doug
>
> On 8/24/16 5:48 AM, Vaz pandolfo, Renata wrote:
>
> Dear FS experts,
>
> I downloaded the FS 6.0 dev version for Linux on
Dear FS experts,
Is there a complete list of all output files followed by their description?
The one I can find online seems to be incomplete (and/or out of date):
https://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllOutputFiles#A-allOutputFiles
For example, the volumes brain.mgz and brainmask.mgz.
Dear FS experts,
I downloaded the FS 6.0 dev version for Linux on 11.08.2016 and now I see
that there is a new version since the 14th of August.
I ran about 20 recon-alls with the 11.08 version and now I am wondering if
there were any major changes between that and the new one, and if so,
whether
s_data/T1s_and_T2s/20110815/ \
> -T2
~/Documents/Daten_Renata/Hippocampus_data/T1s_and_T2s/20110815/o20160524_143200t2tirmcordarkfluidhipp3mmGRAPPAs006a1001.nii.gz
\
> -T2pial -hippocampal-subfields-T1
Thanks!
On Thu, Jul 7, 2016 at 2:15 PM, Vaz pandolfo, Renata wrote:
> Thank you!
>
>
.harvard.edu [mailto:
> freesurfer-boun...@nmr.mgh.harvard.edu] *On Behalf Of *Vaz pandolfo,
> Renata
> *Sent:* Thursday, July 07, 2016 8:05 AM
> *To:* freesurfer@nmr.mgh.harvard.edu
> *Subject:* [Freesurfer] recon-all exited with error: reading
> lh.BA1_exvivo.label
>
>
>
>
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