[Freesurfer] long_mris_slopes

2021-10-21 Thread Veena Nair
External Email - Use Caution Hello, I am trying to do some preliminary analysis of a longitudinal dataset, following the tutorial. I am running FS on Ubuntu 20.04 and freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c I have finished processing the dataset; to prepare the

Re: [Freesurfer] long_mris_slopes

2021-10-22 Thread Veena Nair
External Email - Use Caution That worked! *python2 /opt/softwarepackages/freesurfer/bin/long_mris_slopes --qdec qdec/long.qdec.table.dat --meas thickness --hemi lh --do-avg --do-rate --do-pc1 --do-spc --do-stack --do-label --time months --qcache fsaverage --sd $SUBJECTS_DIR* Tha