never ran autorecon3. Is there a
reason for this? Usually we run all the way through autorecon3 before running
the T2pial stuff
cheers
Bruce
On Fri, 22 Feb 2019, Weber, Wade A wrote:
>
> External Email - Use Caution
>
> Hi all,
>
>
>
> I’m trying to run –autor
: [Freesurfer] ?h.white does not exist
Hi Wade
I don't think you can just skip autorecon3. Can you try running it first and
see if that fixes your problems?
cheers
Bruce
On Fri, 22 Feb 2019, Weber, Wade A
wrote:
>External Email - Use Caution
>
> Hi Bruce,
>
> I'm usi
ginal Message-
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Bruce Fischl
Sent: Friday, February 22, 2019 12:06 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] ?h.white does not exist
no, you need to run autorecon2 first
On Fri, 22 Feb 2019, Weber, Wade A
wrote:
>
, you need to run autorecon2 first
On Fri, 22 Feb 2019, Weber, Wade A wrote:
External Email - Use Caution
I can, but how will autorecon3 run without finishing autorecon2?
-Original Message-
From:
freesurfer-boun...@nmr.mgh.harvard.edu<mailto:freesurfer-boun...@nmr.mgh.har
External Email - Use Caution
Hi all you Freesurfer users!
I have scans on a person that are slightly different protocols (like 1mm voxels
vs. 0.8mm voxels amongst other setting differences), and I ran them through
recon-all. Is there a way to quantify which one came through wit
alues are in the aseg.stats file
On 4/11/19 3:38 PM, Weber, Wade A wrote:
>
> External Email - Use Caution
>
> Hi all you Freesurfer users!
>
> I have scans on a person that are slightly different protocols (like
> 1mm voxels vs. 0.8mm voxels amongst other setting diffe
