[Freesurfer] DPABI V8.0, DPABISurfSlurm and DPABI Harmonization module were released!

2023-11-06 Thread YAN Chao-Gan
External Email - Use Caution Dear colleagues, We are pleased to announce the release of DPABI V8.0, DPABISurfSlurm and DPABI Harmonization module. New features of DPABI_V8.0_23 (download at

[Freesurfer] DPABI V7.0 (together with DPABIFiber V1.0 and DPABISurf V2.0) were released!

2023-01-13 Thread YAN Chao-Gan
External Email - Use Caution Dear Colleagues, We are pleased to announce the release of DPABI V7.0 (together with DPABIFiber V1.0 and DPABISurf V2.0)! New features of DPABI_V7.0_230110 (download at

[Freesurfer] The DPABINet Brain Network Open Course is freely available online now!

2022-05-23 Thread YAN Chao-Gan
External Email - Use Caution Dear Colleagues, The human brain is one of the most complex network systems in the universe, consisting of about 1011 neurons and about 1015 connections. Since the human brain is a highly integrated and cooperating complex system, studying the

[Freesurfer] [Moved to Europe Friendly Time Zone] DPABINet Brain Network Online Training Camp

2022-03-28 Thread YAN Chao-Gan
External Email - Use Caution *[Given that most registered trainees are from Europe, the training time was moved to Europe friendly time zone]* The human brain is one of the most complex network systems in the universe, consisting of about 1011 neurons and about 1015 connections.

[Freesurfer] [Deadline extended to July 1] NeuroImage: Reports: Call for papers for Special Issue on Replication findings in neuroimaging studies

2022-02-25 Thread YAN Chao-Gan
N7ICWb-WYuMxe8iL5BYpE8pynKRKrsd0WMdUgbWWh5yOZF3njcCbBlurNvxf2mozoAojdAYAiRWHEq4I87g/https%3A%2F%2Fwww.elsevier.com%2Fjournals%2Fneuroimage-reports%2F2666-9560%2Fguide-for-authors Inquiries, including questions about appropriate topics, may be sent electronically to Dr. Yan Chao-Gan (ycg@gmail.com) Best, Chao-Gan -- Chao-Gan YAN, Ph.D. Professor, Pri

[Freesurfer] NeuroImage: Reports: Call for papers for Special Issue on Replication findings in neuroimaging studies

2021-10-16 Thread YAN Chao-Gan
-5KUQm0arIIEsaAYPW9RNup6sNcqWcg/https%3A%2F%2Fwww.elsevier.com%2Fjournals%2Fneuroimage-reports%2F2666-9560%2Fguide-for-authors Inquiries, including questions about appropriate topics, may be sent electronically to Dr. Yan Chao-Gan (ycg@gmail.com). Best, Chao-Gan -- Chao-Gan YAN, Ph.D. Professor, Principal

[Freesurfer] DPABI V4.3, DPABISurf V1.3 and DPARSF V5.0 were released!

2020-03-02 Thread YAN Chao-Gan
External Email - Use Caution Dear colleagues, We are pleased to announce the release of DPABI V4.3, DPABISurf V1.3 and DPARSF V5.0. New features of DPABI_V4.3_200301 (download at http://rfmri.org/dpabi, please also update the docker file by: docker pull cgyan/dpabi): 1.

[Freesurfer] DPABISurf V1.2 Is Released

2019-09-23 Thread YAN Chao-Gan
External Email - Use Caution Dear Colleagues, We are pleased to announce the release of DPABISurf V1.2! DPABISurf is a surface-based resting-state fMRI data analysis toolbox evolved from DPABI/DPARSF, as easy-to-use as DPABI/DPARSF. DPABISurf is based on fMRIPprep 1.5.0 (Esteban

[Freesurfer] The R-fMRI Course V3.0 Is Released

2019-08-18 Thread YAN Chao-Gan
External Email - Use Caution Dear Colleagues, We are pleased to announce the release of The R-fMRI Course V3.0 ( http://rfmri.org/Course)! The R-fMRI Course V3.0 is a major update since V2.1. The R-fMRI Course V3.0 systematically introduces the principles of resting-state fMRI

[Freesurfer] DPABISurf V1.1 Is Released

2019-07-25 Thread YAN Chao-Gan
External Email - Use Caution Dear Colleagues, We are pleased to announce the release of DPABISurf V1.1! DPABISurf is a surface-based resting-state fMRI data analysis toolbox evolved from DPABI/DPARSF, as easy-to-use as DPABI/DPARSF. DPABISurf is based on fMRIPprep 1.4.1 (Esteban

[Freesurfer] DPABISurf: A Surface-Based Resting-State fMRI Data Analysis Toolbox

2019-03-06 Thread YAN Chao-Gan
External Email - Use Caution Dear Colleagues, We are pleased to announce the release of DPABISurf! DPABISurf is a surface-based resting-state fMRI data analysis toolbox evolved from DPABI/DPARSF, as easy-to-use as DPABI/DPARSF. DPABISurf is based on fMRIPprep 1.3.0.post3 (Esteban

Re: [Freesurfer] Bonferroni correction of 2spaces or 3spaces

2018-11-20 Thread YAN Chao-Gan
e as part of the correction for mult comp but when > you run mri_glmfit. When you run it on a volume, you have to specify the > mask, so the mask depends upon your application. For fsfast, the mask in > $FREESURFER_HOME/subjects/fsaverage/mri.2mm is used. > > On 11/20/18 4:5

Re: [Freesurfer] Bonferroni correction of 2spaces or 3spaces

2018-11-20 Thread YAN Chao-Gan
> > On 11/16/18 7:34 PM, YAN Chao-Gan wrote: > > External Email - Use Caution > Dear freesurfer experts, > > I have a pretty naive question but would like to confirm. > > When we use --3spaces option in multiple comparison correction, does that > mean

Re: [Freesurfer] Bonferroni correction of 2spaces or 3spaces

2018-11-19 Thread YAN Chao-Gan
External Email - Use Caution Dear Douglas, Thanks a lot for your reply! That's very clear! Best, Chao-Gan On Tue, Nov 20, 2018 at 10:12 AM Greve, Douglas N.,Ph.D. < dgr...@mgh.harvard.edu> wrote: > > > On 11/16/18 7:34 PM, YAN Chao-Gan wrote: > >

[Freesurfer] Bonferroni correction of 2spaces or 3spaces

2018-11-16 Thread YAN Chao-Gan
External Email - Use Caution Dear freesurfer experts, I have a pretty naive question but would like to confirm. When we use --3spaces option in multiple comparison correction, does that mean we set the Cluster-wise threshold (cwp, not Cluster Defining Threshold or Cluster