[Freesurfer] Ynt: Desikan Atlas in volume space (ece ulug)

2018-11-09 Thread ece ulug
e helpful. (for every m file) Best, Ece Gönderen: Mcnorgan, Christopher adına freesurfer-boun...@nmr.mgh.harvard.edu Gönderildi: 6 Kasım 2018 Salı 20:05 Kime: Freesurfer Mailing List Konu: Re: [Freesurfer] Desikan Atlas in volume space (ece ulug)

[Freesurfer] Ynt: Ynt: İlt: Desikan Atlas in volume space

2018-11-06 Thread ece ulug
x27;t know what it would be if it existed. Maybe we can take a step back and you can let us know what you are trying to achieve? On Mon, 5 Nov 2018, ece ulug wrote: > > External Email - Use Caution > > Thanks for your reply doctor. Actually I want to access Desikan K. Atlas

[Freesurfer] Ynt: İlt: Desikan Atlas in volume space

2018-11-05 Thread ece ulug
parcellation is sampled into the volume alread in the file aparc+aseg.mgz in the subject's mri dir. Is that what you are looking for? cheers Bruce On Mon, 5 Nov 2018, ece ulug wrote: > > External Email - Use Caution > > Dear Experts, > > > I am very beginner in

Re: [Freesurfer] Ynt: Ynt: Desikan Atlas in MNI Space

2018-10-11 Thread ece ulug
or VBM? If so, then you can use mri_label2vol specifying the desikan > annotation as the --annot and using > $FREESURFER_HOME/average/mni152.register.dat as the registration file. > >> On 10/11/2018 11:42 AM, ece ulug wrote: >> >> External Email - Use Cautio

[Freesurfer] Ynt: Ynt: Desikan Atlas in MNI Space

2018-10-11 Thread ece ulug
o map the aparc into the vbm volume? On 10/11/2018 09:59 AM, ece ulug wrote: > > External Email - Use Caution > > Hi, > > May be i cannot tell well, > > > I would like to use the Desikan atlas, which is a surface-based atlas > normally, as a volume template. >

[Freesurfer] Ynt: Desikan Atlas in MNI Space

2018-10-11 Thread ece ulug
brain using Desikan Atlas.nii? Ece Gönderen: ece ulug Gönderildi: 10 Ekim 2018 Çarşamba 12:27 Kime: freesurfer@nmr.mgh.harvard.edu Konu: Desikan Atlas in MNI Space Dear All, I am a master student in Turkey. For my thesis; I have to do exactly this; Desikan

[Freesurfer] Desikan Atlas in MNI Space

2018-10-10 Thread ece ulug
External Email - Use Caution Dear All, I am a master student in Turkey. For my thesis; I have to do exactly this; Desikan atlas (which I have in the tailarach space) in the MNI space, as a file (Desikan_mni.nii). I am aware that transforming from one space to the other is not a