[Freesurfer] Question about lesions output

2023-11-16 Thread reza razmara
External Email - Use Caution Hi freesurfer I did an experiment about lesions about the output of samseg. And the results are as follows: The volume of lesions in label 99 in seg.mgz result is 745 mm^3. The samseg output for lesions in samseg.stats is 633 mm^3. Is it ok? Why are

Re: [Freesurfer] Question about lesions output of samseg

2023-11-16 Thread reza razmara
ute a more accurate volume. > They should still be very close though. > > On 11/16/2023 6:46 AM, reza razmara wrote: > > External Email - Use Caution > Hi freesurfer team > > I use samseg for lesion segmentation. In the result of .stats i see the > lesions volu

[Freesurfer] Question about lesions output of samseg

2023-11-16 Thread reza razmara
External Email - Use Caution Hi freesurfer team I use samseg for lesion segmentation. In the result of .stats i see the lesions volume. But when i extract lesions seprately as a new file we know that it uses the label 99 for extraction. But when i calculate the volume of this