Re: [Freesurfer] % overlap of multiple labels

2017-11-20 Thread Yagmur Ozdemir 19
support list Subject: Re: [Freesurfer] % overlap of multiple labels I'm not sure I really understand your question. For the annotation case it reads the color table out of the annotation file (it is stored in the header), then gots through every annotation in the table in order and computes overlap

Re: [Freesurfer] % overlap of multiple labels

2017-11-20 Thread Bruce Fischl
d.edu] > Sent: Saturday, November 18, 2017 5:43 PM > To: Freesurfer support list > Subject: Re: [Freesurfer] % overlap of multiple labels > > Hi Idil > > I think you can use --label-list for multiple labels, or stuff them into > annot files and it should do everything it fi

Re: [Freesurfer] % overlap of multiple labels

2017-11-20 Thread Yagmur Ozdemir 19
To: Freesurfer support list Subject: Re: [Freesurfer] % overlap of multiple labels Hi Idil I think you can use --label-list for multiple labels, or stuff them into annot files and it should do everything it finds. cheers Bruce On Fri, 17 Nov 2017, Yagmur Ozdemir 19 wrote: > Hello Freesurfer expe

Re: [Freesurfer] % overlap of multiple labels

2017-11-18 Thread Bruce Fischl
Hi Idil I think you can use --label-list for multiple labels, or stuff them into annot files and it should do everything it finds. cheers Bruce On Fri, 17 Nov 2017, Yagmur Ozdemir 19 wrote: > Hello Freesurfer experts, > > I am using the mris_compute_parc_overlap command to compute the %

[Freesurfer] % overlap of multiple labels

2017-11-17 Thread Yagmur Ozdemir 19
Hello Freesurfer experts, I am using the mris_compute_parc_overlap command to compute the % overlap of two labels of the same region. Is there a way to do this for multiple labels? Best Idil ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu