Re: [Freesurfer] 'fsaverage' directory

2012-01-11 Thread swoodman
Thank you! > sandra, > > the two fsaverage's that you are using are the same. you can change one > of the links to point at the other if you prefer, or continue to use it > as-is. it will not affect the results. > > n. > > > On Tue, 2012-01-10 at 15:10 -0500, swood...@nmr.mgh.harvard.edu wrote:

Re: [Freesurfer] 'fsaverage' directory

2012-01-10 Thread Nick Schmansky
sandra, the two fsaverage's that you are using are the same. you can change one of the links to point at the other if you prefer, or continue to use it as-is. it will not affect the results. n. On Tue, 2012-01-10 at 15:10 -0500, swood...@nmr.mgh.harvard.edu wrote: > Hi all, > > We are trying

[Freesurfer] 'fsaverage' directory

2012-01-10 Thread swoodman
Hi all, We are trying to run exactly the same analysis, particularly the recon-all command, from two different directories. We've found that both directories have '/fsaverage' but that they are sourcing two different links/paths. Why is this and is there a difference in how analysis will be run/