Re: [Freesurfer] [IMPORTANT MESSAGE] Subfields & MCR problems solved

2022-04-08 Thread Iglesias Gonzalez, Juan E.
Dear Andrei, I don’t think there’s a fixed date for the next release, but the development version can be downloaded from here: https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/dev/ Cheers, /E Juan Eugenio Iglesias http://www.jeiglesias.com On Apr 8, 2022, at 12:04, Andrei Bieger mailt

Re: [Freesurfer] [IMPORTANT MESSAGE] Subfields & MCR problems solved

2022-04-08 Thread Andrei Bieger
External Email - Use Caution Thank you for reporting this, Dr Iglesias, I have a few questions, as I'm currently analyzing results from longitudinal hippocampal segmentation: 1- When is the next release, including these fixes, due? 2- Is the development version, or a beta version

Re: [Freesurfer] [IMPORTANT MESSAGE] Subfields & MCR problems solved

2022-04-08 Thread Iglesias Gonzalez, Juan E.
Yes, it does. Again: I’m terribly sorry about this. The reason why it slipped is that the segmentations themselves are fine, but the volumes in the text files are not. The good news is that the bug leads to underestimated change, i.e., false negatives - rather than false positives. Juan Euge

Re: [Freesurfer] [IMPORTANT MESSAGE] Subfields & MCR problems solved

2022-04-08 Thread Otília C . d'Almeida
External Email - Use Caution dear J.E.Iglesias, can you please clarify me if this afects _longitudinal hippocampal subfield (& amygdala) segmentation_ in FREESURFER 7.1 version? Thank you for reporting this issue. with kind regards, -- OTÍLIA C.D'ALMEIDA A 2022-04-08 16:4

Re: [Freesurfer] [IMPORTANT MESSAGE] Subfields & MCR problems solved

2022-04-08 Thread Iglesias Gonzalez, Juan E.
PS: these changes have happened in the development version, and will be incorporated into the next release. Juan Eugenio Iglesias http://www.jeiglesias.com On Apr 8, 2022, at 11:25, Iglesias Gonzalez, Juan E. mailto:jiglesiasgonza...@mgh.harvard.edu>> wrote: Dear all, We have recently fixed

[Freesurfer] [IMPORTANT MESSAGE] Subfields & MCR problems solved

2022-04-08 Thread Iglesias Gonzalez, Juan E.
Dear all, We have recently fixed two problems in the subfield modules using the Matlab runtime: 1. We have moved on from MatlabR2014b to MatlabR2019b, which enables users to run the code in more modern versions of Mac OS. 2. A bug in the the longitudinal hippocampal subfield (& amygdala) segme