Hello Carissa,
There have been some changes to the files related to the “—make all” option.
You can try downloading an updated version of the
recon-all.makefile from the list of files under,
ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/dev_binaries/centos7_x86_64/
and replace the
Hello,
I am running recon-all for several subjects’ 7T data using Freesurfer version
6.0 and currently trying to ensure appropriate skull stripping and pial/wm
surface generation. For a few participants that needed some control points
added and for which I reran them through the –autorecon2-cp
