Re: [Freesurfer] 回复: The file absence problem of the recon-all -all output

2024-06-28 Thread Douglas N. Greve
Use orig.mgz On 6/27/2024 9:47 PM, Quanjiang Liu wrote: External Email - Use Caution   Sorry to bother you again. I want to know that the standard input to get the standard lh.seghead and rh.seghead. Is it the T1.mgz or the brain.mgz in the mri folder which is one of the output files

[Freesurfer] 回复: The file absence problem of the recon-all -all output

2024-06-27 Thread Quanjiang Liu
External Email - Use Caution Sorry to bother you again. I want to know that the standard input to get the standard lh.seghead and rh.seghead. Is it the T1.mgz or the brain.mgz in the mri folder which is one of the output files of recon-all -all command. Best, _

[Freesurfer] 回复: The file absence problem of the recon-all -all output

2024-06-26 Thread Quanjiang Liu
External Email - Use Caution Thank you! 发件人: freesurfer-boun...@nmr.mgh.harvard.edu 代表 Douglas N. Greve 发送时间: 2024年6月27日 6:35 收件人: freesurfer@nmr.mgh.harvard.edu 主题: Re: [Freesurfer] The file absence problem of the recon-all -all output 你通常不会收

[Freesurfer] 回复: The file absence problem of the recon-all -all output

2024-06-26 Thread Quanjiang Liu
External Email - Use Caution The command used by me is below: find $input_dir -name "sub-CC1*.nii.gz" | parallel -j $threads recon-all -i {} -s {.} -all -qcache 发件人: Quanjiang Liu 发送时间: 2024年6月27日 2:11 收件人: freesurfer@nmr.mgh.harvard.edu 主题: The

[Freesurfer] 回复: The file absence problem of the recon-all -all output

2024-06-26 Thread Quanjiang Liu
External Email - Use Caution [https://res.public.onecdn.static.microsoft/assets/mail/file-icon/png/generic_16x16.png]freesurfer_recon-all_1.py.out _