You should register them using bbregister, then use mri_vol2vol to resample
Cheers
Bruce
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of ??
Sent: Saturday, March 6, 2021 7:17 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Freesurfer consult
External Email - Use
External Email - Use Caution
Dear Sir,
Sorry for the inconvenience, We meet a trouble when using the Freesurfer. We
desire to resampling structural data in the diffusion space. But the diffusion
data were processed using FSL. There is no register.dat, but according to
Freesu
External Email - Use Caution
Dear Sir,
Sorry for the inconvenience, We meet a trouble when using the Freesurfer. We
desire to resampling structural data in the diffusion space. But the diffusion
data were processed using FSL. There is no register.dat, but according to
Freesu
Dear FS expert：
Today I put two contrast in the file {subjects},and run the command line
"recon-all -s mgz -all", several minutes later,the terminal tells error,it says:
[brain@localhost ~]$ recon-all -s mgz -all
Subject Stamp: freesurfer-Linux-centos4-stable-pub-v5.1.0
Current Stamp: frees
Hi haochuanxi
please post to the list so that others can help! It looks to me like your
voxel size is (0.4688, 0.4688, 1.19996). Is that the case? If so, it's
going to be har to reconstruct good surfaces even if you find a machine
with enough memory. "in plane" means the resolution of your da
are your data really .46 mm in plane? It looks you are running out of
memory, but even if you weren't it's very hard to reconstruct data that is
that anisotropic (0.4688, 0.4688, 1.19996). You are better off getting 1mm
isotropic and using it, which these days with 3T and 32 channels is only
4-
转发邮件信息
发件人："传玺"
发送日期：2012-04-11 19:26:41
收件人：freesurfer
主题：[Freesurfer] consult
Dear FS expert：
Today i put two contrast in the file {subjects},and run the command line
"recon-all -s mgz -all", several minutes later,the terminal tells er
Dear FS expert：
Today i put two contrast in the file {subjects},and run the command line
"recon-all -s mgz -all", several minutes later,the terminal tells error,it says:
[brain@localhost ~]$ recon-all -s mgz -all
Subject Stamp: freesurfer-Linux-centos4-stable-pub-v5.1.0
Current Stamp: frees
