Re: [Freesurfer] mris_flatten error: bad vertex

Hi Foteini we need a lot more information. How did you create the patch? What was your command line and full screen output? What version of FS are you using? cheers Bruce On Tue, 20 Feb 2018, Foteini Protopapa wrote: > Dear FreeSurfer Experts, > > > Can somebody tell me if there is a solution

Re: [Freesurfer] mris_flatten error: bad vertex

Dear FreeSurfer Experts, Can somebody tell me if there is a solution to this mris_flatten error? I get... MRISreadPatch: bad vertex # (144585) found in patch file and is not about how I save my patch or where. I have done it another 82 times and everything worked perfectly. Any insights/

Re: [Freesurfer] mris_flatten error: bad vertex

Hi Ji that does sound strange! Can you tar and gzip the subject and upload it to our website so I can see if I can replicate the problem? cheers Bruce On Thu, 17 Mar 2016, Ji Won Bang wrote: > Dear. Freesurfer experts. > > Hi. > > I'm having a problem with mris_flatten (version 5.3.0) > >

Re: [Freesurfer] mris_flatten error: bad vertex

Dear. Bruce. Thanks a lot for your help! I attached the tar.gz file for mri below. If you need anything more, let me know. Thanks, Ji Won​ replay06_mri.tar.gz ​ 2016-03-17 11:40 GMT-04:00 Bruce Fischl

[Freesurfer] mris_flatten error: bad vertex

Dear. Freesurfer experts. Hi. I'm having a problem with mris_flatten (version 5.3.0) Could you please help me fix this problem? My command line is: mris_flatten -w 0 -distances 12 7 $SUBJECTS_DIR/$SUBJECT/surf/lh.oc.patch.3d $SUBJECTS_DIR/$SUBJECT/surf/lh.oc.patch.flat It returns the error: