Re: [Freesurfer] 2D representation of the cortex to get cortical thickness measure

2015-01-21 Thread Bruce Fischl
Hi Mohammad, the thickness can be displayed as a map on any surface we create. We do create ?h.sphere files by default, so you can use those if you want. If you'd rather a planar representation you need to make cuts in the inflated surface and use mris_flatten. cheers Bruce On Wed, 21 Jan

[Freesurfer] 2D representation of the cortex to get cortical thickness measure

2015-01-21 Thread Zia, Mohammad
Hi, Is it possible to get over some 2D representation of the cortex (whether it's on a plane, on the surface of a sphere, it doesn't matter (although the plane would probably be easiest to work with)) to get cortical thickness measures at every location? Thanks, --Mohammad This e-mail mes