Re: [Freesurfer] 7T reconstruction

2014-10-29 Thread B V
Thanks! Best, B On Wed, Oct 29, 2014 at 10:34 AM, Douglas N Greve wrote: > > Create a voxel shift map using epidewarp.fsl (only the shift map is > needed, don't use this to dewarp the data). Save this in > bold/b0dcmap.nii (or nii.gz). When you run preproc-sess and > mkanalysis-sess add -b0dc (s

Re: [Freesurfer] 7T reconstruction

2014-10-29 Thread Douglas N Greve
Create a voxel shift map using epidewarp.fsl (only the shift map is needed, don't use this to dewarp the data). Save this in bold/b0dcmap.nii (or nii.gz). When you run preproc-sess and mkanalysis-sess add -b0dc (stands for B0 distortion correction). doug On 10/28/2014 01:14 PM, B V wrote: >

[Freesurfer] 7T reconstruction

2014-10-28 Thread B V
Hello, I am interested in using functional data collected from 7t using freesurfer and fsfast. We would like to use EPI field maps to warp this data to 3T anatomical space. Can anyone guide me as to how to do this. Best, B ___ Freesurfer mailing list Free