Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed} {Disarmed}

2015-11-03 Thread Martin Reuter
To: freesurfer@nmr.mgh.harvard.edu From: mreu...@nmr.mgh.harvard.edu Date: Tue, 3 Nov 2015 12:10:17 -0500 Subject: Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed} Dear Pablo, maybe what you

Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed} {Disarmed}

2015-11-03 Thread pablo najt
? Thanks Pablo To: freesurfer@nmr.mgh.harvard.edu From: mreu...@nmr.mgh.harvard.edu Date: Tue, 3 Nov 2015 12:10:17 -0500 Subject: Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed} Dear Pablo, maybe what you want is a group x age interaction

Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed}

2015-11-03 Thread Martin Reuter
54:41 -0400 Subject: Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed} Hi Pablo, you should run something like this to get the ni: [M,Y,ni] = sortData(M,1,Y,sID); # (sorts the data) see https://surfer.nmr.mgh.harvard.edu/fswiki/LinearM

Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed}

2015-11-03 Thread pablo najt
:13:51 -0400 Subject: Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed} Hi Pablo, the sortData function sorts the rows so that entries from the same subject (in your case same family) are blocked and that within each block the

Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed}

2015-10-27 Thread Martin Reuter
(M,1,Y,sID) To: freesurfer@nmr.mgh.harvard.edu From: mreu...@nmr.mgh.harvard.edu Date: Wed, 14 Oct 2015 10:54:41 -0400 Subject: Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed} Hi Pablo, you should run something like this to get the ni

Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed}

2015-10-27 Thread pablo najt
ksPablo [M, Y, ni] = sortData(M,1,Y,sID) To: freesurfer@nmr.mgh.harvard.edu From: mreu...@nmr.mgh.harvard.edu Date: Wed, 14 Oct 2015 10:54:41 -0400 Subject: Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed} Hi Pablo, you should run something li

Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed}

2015-10-19 Thread pablo najt
...@yahoo.es To: freesurfer@nmr.mgh.harvard.edu CC: pablon...@hotmail.com Subject: Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed} Hi Pablo Yes, too many locations at which the estimation algorithm didn't converge is problematic. That might mean that havin

Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed}

2015-10-16 Thread jorge luis
ck it thoroughly. Cheers-Jorge De: pablo najt Para: "freesurfer@nmr.mgh.harvard.edu" Enviado: Viernes 16 de octubre de 2015 1:43 Asunto: Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed} #yiv7275178360 #yiv7275178360 --.yiv7275178360hmme

Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed}

2015-10-15 Thread pablo najt
for theLocal cluster), increase the value of the NumWorkers property for thecluster. The default value of NumWorkers for a Local cluster is the number of cores on the local machine. To: freesur...@nmr.mgh.harvard.eduFrom: mreu...@nmr.mgh.harvard.eduDate:

Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed}

2015-10-15 Thread jorge luis
sum(ni) and length(X) give the same value before running the above command. Cheers-Jorge De: pablo najt Para: Freesurfer support list Enviado: Jueves 15 de octubre de 2015 7:18 Asunto: Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed

Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed}

2015-10-15 Thread Martin Reuter
e of NumWorkers for a Local cluster is the number of cores on the local machine. To: freesurfer@nmr.mgh.harvard.edu From: mreu...@nmr.mgh.harvard.edu Date: Wed, 14 Oct 2015 10:54:41 -0400 Subject: Re: [Freesurfer]

Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed}

2015-10-15 Thread pablo najt
The default value of NumWorkers for a Local cluster is the number of cores on the local machine. To: freesurfer@nmr.mgh.harvard.edu From: mreu...@nmr.mgh.harvard.edu Date: Wed, 14 Oct 2015 10:54:41 -0400 Subject: Re: [Freesurfer] A mixed effect model approach in within subj

Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed}

2015-10-14 Thread Martin Reuter
Hi Pablo, you should run something like this to get the ni: [M,Y,ni] = sortData(M,1,Y,sID); # (sorts the data) see https://surfer.nmr.mgh.harvard.edu/fswiki/LinearMixedEffectsModels hope that helps, Martin On 10/14/2015 10:43 AM, pablo najt wrote: Dear FS experts. I have query about a rela

Re: [Freesurfer] A mixed effect model approach in within subject dataset {Disarmed}

2015-10-14 Thread pablo najt
Dear FS experts.I have query about a relating to a previous email (below). I am aiming to run a LME analysis on cross-sectional data from different families and have variable 'family' (number of families) as my NI vector. My design has three groups and therefore I am not able to use qdec. I a