[Freesurfer] Analyzing slice data with freesurfer?

2018-06-11 Thread John Absher
External Email - Use Caution We are attempting to analyze archival MRI data obtained during routine clinical care. Unfortunately, the standard clinical MR sequences do not include 3D volumes. Will the freesurfer algorithm work on slice data so that each slice could be marked wit

Re: [Freesurfer] Analyzing slice data with freesurfer?

2018-06-11 Thread Bruce Fischl
Hi John it's not really a question of slice vs volume as much as it is of resolution. You can certainly try it, but usually around 2 or 2.5mm you can no longer resolve too many cortical folds an things start failign. cheers Bruce On Mon, 11 Jun 2018, John Absher wrote: External